Summary and Schedule
This is a new lesson built with The Carpentries Workbench.
| Setup Instructions | Download files required for the lesson | |
| Duration: 00h 00m | 1. Introduction: Single-Cell Transcriptomics in Weakly Electric Fish |
What genomic resources have been developed for weakly electric fish, and
why? How does single-cell RNA sequencing differ from bulk RNA-seq, and why does that matter for studying the electric organ system? What is the integrated story linking hormones, the electric organ, sensory receptor tuning, and central corollary discharge in mormyrid fish? How can changes at the cellular and molecular level reshape behavior across seasonal, developmental, and evolutionary timescales? |
| Duration: 00h 40m | 2. 11-Ketotestosterone Implantation in Mormyrid Electric Fish | |
| Duration: 02h 15m | 3. Examining EOD Duration from Raw Recordings |
How do we load JSON EOD recordings into R? How is EOD duration measured from a raw waveform? Did 11-ketotestosterone treatment change EOD duration over time? |
| Duration: 03h 00m | Finish |
The actual schedule may vary slightly depending on the topics and exercises chosen by the instructor.
FIXME: Setup instructions live in this document. Please specify the tools and the data sets the Learner needs to have installed.
Data Sets
Download the data zip file and unzip it to your Desktop
Software Setup
Details
Setup for different systems can be presented in dropdown menus via a
solution tag. They will join to this discussion block, so
you can give a general overview of the software used in this lesson here
and fill out the individual operating systems (and potentially add more,
e.g. online setup) in the solutions blocks.
Use PuTTY
Use Terminal.app
Use Terminal